Imaging Informatics and the Human Brain Project: the Role of Structure.

نویسندگان

  • J F Brinkley
  • C Rosse
چکیده

#Neuroimage_1.20. Agrawal M, Harwood D, Duraiswami R,Davis LS, Luther PW. Three-dimensional ultrastructure from transmission electronmicropscope tilt series. In: Proceedings, Second Indian Conference on Vision,Graphics and Image Processing.Bangalore, India; 2000. http:// www.umiacs.umd.edu/~mla/tem/icvgipfinal.pdf. 21. Modayur B, Prothero J, Ojemann G,Maravilla K, Brinkley JF. Visualization-based mapping of language function in the brain. Neuroimage 1997;6:245-58.22. Collins DL, Neelin P, Peters TM, Evans AC. Automatic 3-D intersubjectregistration of MR volumetric data instandardized Talairach space. J Comput Assist Tomogr 1994;18(2):192-205.23. Woods RP, Cherry SR, Mazziotta JC. Rapid automated algorithm for aligningand reslicing PET images. J ComputAssist Tomogr 1992;16:620-633. 24. Woods RP, Mazziotta JC, Cherry SR.MRI-PET registration with automated algorithm. J Comput Assist Tomogr1993;17:536-46.25. Ashburner J, Friston KJ. Multimodal image coregistration and partitioning aunified framework. Neuroimage 1997;6(3):209-17.26. MacDonald D. Register: McConnel Brain Imaging Center, Montreal NeurologicalInstitute; 1993. 27. Lichtenbelt B, Crane R, Naqvi S. Intro-duction to Volume Rendering. UpperSaddle River, N.J.: Prentice Hall; 1998. 28. Dale AM, Fischl B, Sereno MI. Corticalsurface-based analysis. I. Segmentation and surface reconstruction. Neuroimage1999;9(2):179-94.29. Collins DL, Holmes DJ, Peters TM, Evans AC. Automatic 3-D model-basedneuroanatomical segmentation. Hum Brain Mapp 1995;3:190-208.30. MacDonald D, Kabani N, Avis D, EvansAC. Automated 3-D extraction of inner and outer surfaces of cerebral cortex fromMRI. Neuroimage 2000;12(3):340-56. 31. Van Essen DC, Drury HA, Dickson J,Harwell J, Hanlon D, Anderson CH. Anintegrated software suite for surfacebased analysis of cerebral cortex. J AmMed Inform Assoc 2001;8(5):443-59. http://stp.wustl.edu.32. Hinshaw KP, Poliakov AV, Martin RF,Moore EB, Shapiro LG, Brinkley JF. Shape-based cortical surface segmen-tation in a workflow environment for visualization brain mapping.2001 http://sig.biostr.washington.edu/publications/online/hinshawbrain01.pdf 33. Brain Innovation B.V. BrainVoyager.http://www.BrainVoyager.de/; 2001. 34. Ng Y, Shiffman S, Brosnan TJ, Links JM,Beach LS, Judge NS, et al. BrainImageJ:Ajava-based framework for interoperability in neuroscience, with specific applicationto neuroimaging. J Am Med Inform Assoc 2001;8(5):431-42.35. Kennedy D. Internet Brain SegmentationRepository. http://neuro-www.mgh. harvard.edu/cma/ibsr/; 2001.36. Prothero JS, Prothero JW. Threedimensional reconstruction from serialsections: I. A portable microcomputer-based software package in Fortran. Comput Biomed Res 1982;15:598-604.37. Foley JD. Computer graphics: Principles and Practice. Reading, Mass.: Addison-Wesley; 2001.38. Shapiro LG, Stockman GC. Computer Vision. Upper Saddle River, N.J.: PrenticeHall; 2001. 39. Choi HS, Haynor DR, Kim Y. Partialvolume tissue classification ofmultichannel magnetic resonance images a mixel model. IEEE Trans Med Imaging1991;10(3):395-407. 40. Zijdenbos AP, Evans AC, Riahi F, SledJ, Chui J, Kollokian V. Automaticquantification of multiple sclerosis lesion volume using stereotactic space. In: Proc.4th Int. Conf. on Visualization in Biomedical Computing. Hamburg; 1996.p. 439-48. 41. Davatzikos C, Bryan RN. Using adeformable surface model to obtain a shape representation of the cortex. IEEETrans Med Imaging 1996;15(6):785-95.42. Haralick RM. Mathematical Morphology: University of Washington; 1988.43. Sandor S, Leahy R. Surface-based labeling of cortical anatomy using a deformableatlas. IEEE Trans Med Imaging1997;16(1):41-54. 44. Lorensen WE, Cline HE. Marching cubes:a high resolution 3-D surface construction algorithm. Comput Graph (ACM)1987;21(4):163-9.45. Kass M, Witkin A, Terzopoulos D. Snakes: active contour models.International Journal of Computer Vision 1987;1(4):321-31.46. Brinkley JF. Hierarchical geometricconstraint networks as a representation for spatial structural knowledge. In:Proceedings, 16th Annual Symposium on Computer Applications in MedicalCare; 1992. p. 140-4.47. Brinkley JF. Knowledge-driven ultrasonic three-dimensional organ modelling.PAMI 1985;PAMI-7(4):431-41. 48. Brinkley JF. A flexible, generic model foranatomic shape: application to interactivetwo-dimensional medical image segmentation and matching. ComputBiomed Res 1993;26:121-42. 49. Fischl B, Sereno MI, Dale AM. Corticalsurface-based analysis. II: Inflation,flattening, and a surface-based coordinate system. Neuroimage 1999;9(2):195-207.50. Wellcome Department of Cognitive Neurology. Statistical ParametricMapping. http://www.fil.ion.ucl.ac.uk/spm/; 2001. 51. Sensor Systems Inc. MedEx. http://medx.sensor.com/products/medx/ index.html; 2001.52. Brinkley JF, Wong BA, Hinshaw KP,Rosse C. Design of an anatomy information system. Computer Graphicsand Applications 1999;19(3):38-48. 53. Wong BA, Rosse C, Brinkley JF. Semi-automatic scene generation using theDigital Anatomist Foundational Model. In: Proceedings, American MedicalInformatics Association Fall Symposium. Washington, D.C.; 1999.p. 637-41.54. Rosse C, Tuttle MS. Explaining the brain to a computer. In: Human Brain ProjectAnnual Meeting; 2001. http://www. nimh.nih.gov/neuroinformatics /rosse2001.cfm.55. Gardner D, Abato M, Knuth KH, DeBellis R, Gardner EP. A functionalontology for neuroinformatics. In: Human Brain Project Annual Meeting; 2001.

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عنوان ژورنال:
  • Yearbook of medical informatics

دوره 1  شماره 

صفحات  -

تاریخ انتشار 2002